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rOpenSci - open tools for open science

rOpenSci - open tools for open science
Open Tools and R Packages for Open Science
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Published
Authors Kshitiz Gupta, Carl Boettiger

Introduction ramlegacy is a new R package to download, cache and read in all the different versions of the RAM Legacy Stock Assessment Database, a public database containing stock assessment results of commercially exploited marine populations from around the world.

Published
Authors Stefanie Butland, Nick Golding, Chris Grieves, Hugo Gruson, Thomas White, Hao Ye

Stefanie Butland, rOpenSci Community Manager Some things are just irresistible to a community manager – PhD student Hugo Gruson’s recent tweets definitely fall into that category.

Published
Authors Stefanie Butland, Ildi Czeller, Bob Rudis

“Security” can be a daunting, scary, and (frankly) quite often a very boring topic. BUT!, we promise that this Community Call on May 7th will be informative, engaging, and enlightening (or, at least not boring)! Applying security best practices is essential not only for developers or sensitive data storage but also for the everyday R user installing R packages, contributing to open source, working with APIs or remote servers.

Published

Our next Community Call, on March 27th, aims to help people learn about using rOpenSci’s R packages to access and analyze taxonomy and biodiversity data, and to recognize the breadth and depth of their applications. We also aim to learn from the discussion how we might improve these tools.

Published
Author OJ Watson

There seem to be a lot of ways to write about your R package, and rather than haveto decide on what to focus on I thought I’d write a little bit about everything.To begin with I thought it best to describe what problem rdhs tries to solve,why it was developed and how I came to be involved in this project.

Published
Authors Stefanie Butland, Scott Chamberlain, Kara Woo

We are pleased to announce the release of our new Code of Conduct. rOpenSci’s community is our best asset and it’s important that we put strong mechanisms in place before we have to act on a report. As before, our Code applies equally to members of the rOpenSci team and to anyone from the community at large participating in in-person or online activities.

Published
Author Nicholas Tierney

In late November 2018, we ran the third annual rOpenSci ozunconf. This is the sibling rOpenSci unconference, held in Australia. We ran the first ozunconf in Brisbane in 2016, and the second in Melbourne in 2017. Photos taken by Ajay from Fotoholics As usual, before the unconf, we started discussion on GitHub issue threads,and the excitement was building with the number of issues.

Published
Author April Wright

I never really thought I would write an R package. I use R pretty casually. Then, this year, I was invited to participate during the last week of the Analytical Paleobiology short course, an intensive month-long experience in quantitative paleontology. I was thrilled to be invited.

Published
Authors Dan Sholler, Stefanie Butland

🎤 Dan Sholler, rOpenSci Postdoctoral Fellow 🕘 Tuesday, December 18, 2018, 10-11AM PST; 7-8PM CET (find your timezone) ☎️ Details for joining the Community Call. Everyone is welcome. No RSVP needed. Researchers use open source software for the capabilities it provides, such as streamlined data access and analysis and interoperability with other pieces of the scientific computing ecosystem.

Published
Authors Alec Robitaille, Quinn Webber, Eric Vander Wal

spatsoc is an R package written by Alec Robitaille, Quinn Webber and Eric Vander Wal of the Wildlife Evolutionary Ecology Lab (WEEL) at Memorial University of Newfoundland. It is the lab’s first R package and was recently accepted through the rOpenSci onboarding process with a big thanks to reviewers Priscilla Minotti and Filipe Teixeira, and editor Lincoln Mullen.